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57 documents dipositats: Tesis [1] Articles [56] Tesis dirigides [6]

Descàrregues: 11189
Descàrregues per document: 192

• Genome-wide studies of mRNA synthesis and degradation in eukaryotes (2012)
  Pérez Ortín, José Enrique; De Miguel-Jiménez, Lola; Chávez, Sebastián
  Descàrregues: 448
• Functional analysis of yeast gene families involved in metabolism of vitamins B1 and B6 (2002)
  Rodríguez Navarro, Susana; Llorente, B.; Rodríguez Manzaneque, M.T.; Ramne, A.; Uber García, Genoveva; Marchesan, D.; Dujon, B.; Herrero, Enrique; Sunnerhagen, P.; Pérez Ortín, José Enrique
  Descàrregues: 443
• Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis (2013)
  Haimovich, G.; Medina Salas, Daniel Alejandro; Causse, S.Z.; Garber, M.; Millán-Zambrano, G.; Barkai, O.; Chávez, Sebastián; Pérez Ortín, José Enrique; Darzacq, X.; Choder, M.
  Descàrregues: 421
• Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms (2004)
  García Martínez, José; Aranda Fernández, Agustín; Pérez Ortín, José Enrique
  Descàrregues: 380
• Genomics and the gene transcription kinetics in yeast. (2007)
  Pérez Ortín, José Enrique; Alepuz Martínez, Paula; Moreno Mariño, Joaquín
  Descàrregues: 363

• Estructura de la cromatina del gen Suc2 de Saccharomyces cerevisiae (1986)
  Pérez Ortín, José Enrique

• Nucleo-cytoplasmic shuttling of RNA-binding factors: mRNA buffering and beyond (2022)
  Pérez Ortín, José Enrique; Chávez, Sebastián
  Descàrregues: 17
• A feedback mechanism controls rDNA copy number evolution in yeast independently of natural selection (2022)
  Arnau Llombart, Vicente; Barba-Aliaga, Marina; Singh, Gaurav; Ferri, Javier; García Martínez, José; Pérez Ortín, José Enrique
  Descàrregues: 24
• RNA-controlled nucleocytoplasmic shuttling of mRNA decay factors regulates mRNA synthesis and a novel mRNA decay pathway (2022)
  Chattopadhyay, Shiladitya; García Martínez, José; Haimovich, G.; Fischer, Jonathan; Khwaja, Aya; Barkai, O.; Chuartzman, Silvia Gabriela; Schuldiner, Maya; Elran, Ron; Rosenberg, Miriam I.; Urim, Shira; Deshmukh, Shubham; Bohnsack, Katherine E.; Bohnsack, Markus T.; Pérez Ortín, José Enrique; Choder, M.
  Descàrregues: 12
• Eukaryotic RNA Polymerases: the many ways to transcribe a gene (2021)
  Barba-Aliaga, Marina; Alepuz Martínez, Paula; Pérez Ortín, José Enrique
  Descàrregues: 33
• A trans‐omics comparison reveals common gene expression strategies in four model organisms and exposes similarities and differences between them (2021)
  Forés Martos, Jaume; Forte Deltell, Anabel; García Martínez, José; Pérez Ortín, José Enrique
  Descàrregues: 55
• Cell volume homeostatically controls the rDNA repeat copy number and rRNA synthesis rate in yeast (2021)
  Pérez Ortín, José Enrique; Mena, Adriana; Barba-Aliaga, Marina; Singh, Abhyudai; Chávez, Sebastián; García Martínez, José
  Descàrregues: 23
• The telomeric Cdc13-Stn1-Ten1 complex regulates RNA polymerase II transcription (2019)
  Calvo, Olga; Grandin, Nathalie; Jordán Plá, Antonio; Miñambres, Esperanza; González-Polo, Noelia; Pérez Ortín, José Enrique; Charbonneau, Michel
  Descàrregues: 104 Altmetrics:
• The mRNA degradation factor Xrn1 regulates transcription elongation in parallel to Ccr4 (2019)
  Begley, Victoria; Corzo, Daniel; Jordán Plá, Antonio; Cuevas-Bermúdez, Abel; De Miguel-Jiménez, Lola; Pérez-Aguado, David; Machuca-Ostos, Mercedes; Navarro, Francisco; Chávez, María José; Pérez Ortín, José Enrique; Chávez, Sebastián
  Descàrregues: 70 Altmetrics:
• Rotavirus symptomatic infection among unvaccinated and vaccinated children in Valencia, Spain (2019)
  Pérez Ortín, José Enrique; Santiso Bellón, Cristina; Vila Vicent, Susana; Carmona Vicente, Noelia; Rodríguez Díaz, Jesús; Buesa Gómez, Javier
  Descàrregues: 24
• The SAGA/TREX‑2 subunit Sus1 binds widely to transcribed genes and affects mRNA turnover globally (2018)
  García Molinero, Varinia; García Martínez, José; Reja, Rohit; Furió‑Tarí, Pedro; Antúnez Temporal, Oreto; Vinayachandran, Vinesh; Conesa, Ana; Pugh, B. Franklin; Pérez Ortín, José Enrique; Rodríguez Navarro, Susana
  Descàrregues: 86 Altmetrics:
• Asymmetric cell division requires specific mechanisms for adjusting global transcription (2017)
  Mena, Adriana; Medina Salas, Daniel Alejandro; García Martínez, José; Begley, Victoria; Singh, Abhyudai; Chávez, Sebastián; Muñoz-Centeno, María de la Cruz; Pérez Ortín, José Enrique
  Descàrregues: 95 Altmetrics:
• Subtracting the sequence bias from partially digested MNase‑seq data reveals a general contribution of TFIIS to nucleosome positioning (2017)
  Gutiérrez, Gabriel; Millán-Zambrano, G.; Medina Salas, Daniel Alejandro; Jordán Plá, Antonio; Pérez Ortín, José Enrique; Peñate, Xenia; Chávez, Sebastián
  Descàrregues: 122 Altmetrics:
• The ribosome assembly gene network is controlled by the feedback regulation of transcription elongation (2017)
  Gómez-Herreros, Fernando; Margaritis, Thanasis; Rodríguez-Galán, Olga; Pelechano García, Vicente José; Begley, Victoria; Millán-Zambrano, G.; Morillo-Huesca, Macarena; Muñoz-Centeno, María de la Cruz; Pérez Ortín, José Enrique; Cruz, Jesús de la; Holstege, Frank C. P.; Chávez, Sebastián
  Descàrregues: 93 Altmetrics:
• Defects in the NC2 repressor affect both canonical and non-coding RNA polymerase II transcription initiation in yeast. (2016)
  Gómez Navarro, Natalia; Jordán Plá, Antonio; Estruch Ros, Francisco; Pérez Ortín, José Enrique
  Descàrregues: 154
• A web application for the unspecific detection of differentially expressed DNA regions in strand-specific expression data (2015)
  Juanes, José M.; Miguel, Ana; Morales, Lucas J.; Pérez Ortín, José Enrique; Arnau Llombart, Vicente
  Descàrregues: 168 Altmetrics:
• Comparative transcriptomic analysis reveals similarities and dissimilarities in saccharomyces cerevisiae wine strains response to nitrogen availability (2015)
  Barbosa, Catarina; García Martínez, José; Pérez Ortín, José Enrique; Mendes Ferreira, A.
  Descàrregues: 194 Altmetrics:
• Chromatin-dependent regulation of RNA polymerases II and III activity throughout the transcription cycle (2015)
  Jordán Plá, Antonio; Gupta, I.; De Miguel-Jiménez, Lola; Steinmetz, Lars; Chávez, Sebastián; Pelechano García, Vicente José; Pérez Ortín, José Enrique
  Descàrregues: 194 Altmetrics:
• The cellular growth rate controls overall mRNA turnover, and modulates either transcription or degradation rates of particular gene regulons (2015)
  García Martínez, José; Delgado Ramos, Lidia; Ayala Gallego, Guillermo; Pelechano García, Vicente José; Medina Salas, Daniel Alejandro; Carrasco, Fany; González, Ramón; Andrés-León, Eduardo; Steinmetz, Lars; Warringer, Jonas; Chávez, Sebastián; Pérez Ortín, José Enrique
  Descàrregues: 159 Altmetrics:
• Cytoplasmic 5'-3' exonuclease Xrn1p is also a genome-wide transcription factor in yeast (2014)
  Medina Salas, Daniel Alejandro; Jordán Plá, Antonio; Millán-Zambrano, G.; Chávez, Sebastián; Choder, M.; Pérez Ortín, José Enrique
  Descàrregues: 183 Altmetrics:
• mRNAstab : a web application for mRNA stability analysis (2013)
  Alic, Andrei; Pérez Ortín, José Enrique; Moreno Mariño, Joaquín; Arnau Llombart, Vicente
  Descàrregues: 249
• Topoisomerase II regulates yeast genes with singular chromatin architectures (2013)
  Nikolaou, C.; Bermúdez, Ignacio; Manichanh, C.; García Martínez, José; Guigó, R.; Pérez Ortín, José Enrique; Roca, Joaquim
  Descàrregues: 288 Altmetrics:
• Nonsense-mediated mRNA decay controls the changes in yeast ribosomal protein pre-mRNAs levels upon osmotic stress (2013)
  Garré García, Elena; Romero Santacreu, Lorena; Barneo Muñoz, Manuela; Miguel, Ana; Pérez Ortín, José Enrique; Alepuz Martínez, Paula
  Descàrregues: 252 Altmetrics:
• Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis (2013)
  Haimovich, G.; Medina Salas, Daniel Alejandro; Causse, S.Z.; Garber, M.; Millán-Zambrano, G.; Barkai, O.; Chávez, Sebastián; Pérez Ortín, José Enrique; Darzacq, X.; Choder, M.
  Descàrregues: 421 Altmetrics:
• The relative importance of transcription rate, cryptic transcription and mRNA stability on shaping stress responses in yeast (2012)
  García Martínez, José; Ayala Gallego, Guillermo; Pelechano García, Vicente José; Chávez, Sebastián; Herrero, Enrique; Pérez Ortín, José Enrique
  Descàrregues: 269
• Genome-wide studies of mRNA synthesis and degradation in eukaryotes (2012)
  Pérez Ortín, José Enrique; De Miguel-Jiménez, Lola; Chávez, Sebastián
  Descàrregues: 448
• Genomic insights into the layers of gene regulation in yeast (2011)
  Pérez Ortín, José Enrique; Medina Salas, Daniel Alejandro; Jordán Plá, Antonio
  Descàrregues: 245
• Heat shock response in yeast involver changes in both transcription rates and mRNA stabilities (2011)
  Castells-Roca, L.; García Martínez, José; Moreno Mariño, Joaquín; Herrero, Enrique; Bellí, G.; Pérez Ortín, José Enrique
  Descàrregues: 188
• A genomic view of mRNA turnover in yeast (2011)
  Pérez Ortín, José Enrique; Jordán Plá, Antonio; Pelechano García, Vicente José
  Descàrregues: 295
• There is a steady-state transcriptome in exponentially growing yeast cells (2010)
  Pelechano García, Vicente José; Pérez Ortín, José Enrique
  Descàrregues: 258
• A method for genome-wide analysis of DNA helical tension by means of psoralen-DNA photobinding (2010)
  Bermúdez, Ignacio; García Martínez, José; Pérez Ortín, José Enrique; Roca, Joaquim
  Descàrregues: 302
• A complete set of nascent transcription rates for yeast genes (2010)
  Pelechano García, Vicente José; Chávez, Sebastián; Pérez Ortín, José Enrique
  Descàrregues: 206 Altmetrics:
• The distribution of active RNA polymerase II along the transcribed region is gene-specific and controlled by elongation factors. (2010)
  Rodríguez-Gil, Alfonso; García Martínez, José; Pelechano García, Vicente José; Muñoz-Centeno, María de la Cruz; Geli, Vincent; Pérez Ortín, José Enrique; Chávez, Sebastián
  Descàrregues: 236
• Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae. (2009)
  Romero Santacreu, Lorena; Moreno Mariño, Joaquín; Pérez Ortín, José Enrique; Alepuz Martínez, Paula
  Descàrregues: 211
• Chimeric genomes of natural hybrids of Saccharomyces cerevisiae and Saccharomyces kudriavzevii (2009)
  Belloch, Carmela; Pérez Torrado, Roberto; González, Sara S.; Pérez Ortín, José Enrique; García Martínez, José; Querol Simón, Amparo; Barrio Esparducer, Eladio
  Descàrregues: 197
• Regulon-specific control of transcription elongation across the yeast genome (2009)
  Pelechano García, Vicente José; Jimeno-González, S.; Rodríguez-Gil, Alfonso; García Martínez, José; Pérez Ortín, José Enrique; Chávez, Sebastián
  Descàrregues: 254 Altmetrics:
• The transcriptional inhibitor thiolutin blocks mRNA degradation. (2008)
  Pelechano García, Vicente José; Pérez Ortín, José Enrique
  Descàrregues: 242
• The inner nuclear membrane protein Src1 associates with subtelomeric genes and alters their regulated gene expression (2008)
  Grund, S.E.; Fischer, Tomás; Cabal, G.G.; Antúnez Temporal, Oreto; Pérez Ortín, José Enrique; Hurt, E.
  Descàrregues: 225
• Genomics of mRNA turnover (2007)
  Pérez Ortín, José Enrique
  Descàrregues: 250
• Genomics and the gene transcription kinetics in yeast. (2007)
  Pérez Ortín, José Enrique; Alepuz Martínez, Paula; Moreno Mariño, Joaquín
  Descàrregues: 363
• Common gene expression strategies revealed by genome-wide analysis in yeast (2007)
  García Martínez, José; González Candelas, Fernando; Pérez Ortín, José Enrique
  Descàrregues: 217
• Saccharomyces cerevisiae signature genes for predicting nitrogen deficiency during alcoholic fermentation (2007)
  Mendes Ferreira, A.; Olmo Muñoz, Marcel·lí del; García Martínez, José; Jiménez Martí, Elena; Leão, C.; Mendes Faia, A.; Pérez Ortín, José Enrique
  Descàrregues: 216
• The Sas3p and Gcn5p histone acetyltransferases are recruited to similar genes. (2007)
  Rosaleny Peralvo, Lorena Estefanía; Ruiz García, Ana Belén; García Martínez, José; Pérez Ortín, José Enrique; Tordera Donderis, Vicente
  Descàrregues: 209
• Transcriptional response of Saccharomyces cerevisiae to different nitrogen concentrations during alcoholic fermentation. (2007)
  Mendes Ferreira, A.; Olmo Muñoz, Marcel·lí del; García Martínez, José; Jiménez Martí, Elena; Mendes Faia, A.; Pérez Ortín, José Enrique; Leão, C.
  Descàrregues: 186
• A genomic study of the Inter-ORF distances in Saccharomyces cerevisiae (2006)
  Pelechano García, Vicente José; García Martínez, José; Pérez Ortín, José Enrique
  Descàrregues: 214
• Homogeneity of Interspecific Hybrids Between Saccharomyces cerevisiae and Saccharomyces uvarum by Phenotypic and Transcriptional Analysis (2005)
  Solieri, L.; De Vero, L.; Antúnez Temporal, Oreto; Pérez Ortín, José Enrique; Giudici, P.; Gullo, M.
  Descàrregues: 141
• Yeast HAT1 and HAT2 deletions have different life-span and transcriptome phenotypes (2005)
  Rosaleny Peralvo, Lorena Estefanía; Antúnez Temporal, Oreto; Ruiz García, Ana Belén; Pérez Ortín, José Enrique; Tordera Donderis, Vicente
  Descàrregues: 221
• CYGD: The Comprehensive Yeast Genome Database (2005)
  Güldener, U; Münsterkötter, M.; Kastenmüller, G; Strack1, N; van Helden, J.; Lemer, C.; Richelles, J.; Wodak, S.J.; García Martínez, José; Pérez Ortín, José Enrique; Michael, H.; Kaps, A.; Talla, E.; Dujon, B.; André, B.; Souciet, J.L.; De Montigny, J.; Bon, E.; Gaillardin, C.; Mewes, H.W.
  Descàrregues: 212
• Genomic run-on evaluates transcription rates for all yeast genes and identifies gene regulatory mechanisms (2004)
  García Martínez, José; Aranda Fernández, Agustín; Pérez Ortín, José Enrique
  Descàrregues: 380 Altmetrics:
• Saccharomyces cerevisiae glutaredoxin 5-deficient cells subjected to constitutive oxidizing conditions are affected in the expression of specific sets of genes (2004)
  Bellí, G.; Molina, M.M; García Martínez, José; Pérez Ortín, José Enrique; Herrero, Enrique
  Descàrregues: 230
• SUS1, a functional component of the SAGA transcription complex and the mRNA export machinery. (2004)
  Rodríguez Navarro, Susana; Luo, Ming Juan; Antúnez Temporal, Oreto; Pérez Ortín, José Enrique; Reed, Robin; Hurt, Ed; Fischer, Tomás; Brettschneider, Susanne
  Descàrregues: 275
• A new set of DNA macrochips for the yeast Saccharomyces cerevisiae: features and uses (2004)
  Alberola Pons, Trinidad; García Martínez, José; Antúnez Temporal, Oreto; Viladevall, Laia; Barceló, Anna; Ariño, Joaquín; Pérez Ortín, José Enrique
  Descàrregues: 205
• Molecular characterization of a chromosomal rearrangement involved in the adaptative evolution of yeast strains (2002)
  Pérez Ortín, José Enrique; Querol Simón, Amparo; Puig Todolí, Sergi; Barrio Esparducer, Eladio
  Descàrregues: 173
• Functional analysis of yeast gene families involved in metabolism of vitamins B1 and B6 (2002)
  Rodríguez Navarro, Susana; Llorente, B.; Rodríguez Manzaneque, M.T.; Ramne, A.; Uber García, Genoveva; Marchesan, D.; Dujon, B.; Herrero, Enrique; Sunnerhagen, P.; Pérez Ortín, José Enrique
  Descàrregues: 443
• Whole genome analysis of a wine yeast strain (2001)
  Hauser, N.C.; Fellenberg, K.; Gil, R.; Bastuck, S.; Hoheisel, J.D.; Pérez Ortín, José Enrique
  Descàrregues: 212
• Statistical analysis of yeast genomic downstream sequences reveals putative polyadenylation signals (2000)
  van Helden, J.; Olmo Muñoz, Marcel·lí del; Pérez Ortín, José Enrique
  Descàrregues: 199
• Mitotic recombination and genetic changes in Saccharomyces cerevisiae during wine fermentation (2000)
  Puig Todolí, Sergi; Querol Simón, Amparo; Barrio Esparducer, Eladio; Pérez Ortín, José Enrique
  Descàrregues: 247

• Functions of the translation factor eIF5A in cellular metabolism and transcriptional control (2023). Barba Aliaga, Marina.
• Functional genomic analysis of the response to hypoxic and oxidative stress in Candida albicans (2017). Miguel Blanco, Ana.
• Análisis genómico de la interacción entre la transcripción y la degradación durante el recambio del mRNA en S. cerevisiae (2015). Medina Salas, Daniel Alejandro.
• BioGRO: un nuveo método de alta resolución para el estudio de la transcripción naciente a escala genómica en levadura (2013). Jordán Plá, Antonio.
• Estudio genómico de la trasncripción y de la degradación de los mRNAs en Saccharomyces cerevisiae (2009). Pelechano García, Vicente José.
• Estudio estructural y funcional de la región 3' del gen FBP1 de Saccharomyces cerevisiae (1996). Aranda Fernández, Agustín.